Prediction of noncovalent interactions for PDB structure COMPLEX_1_PROTEIN
==========================================================================
Created on 2025/12/04 using PLIP v2.2.2

If you are using PLIP in your work, please cite:
Adasme,M. et al. PLIP 2021: expanding the scope of the protein-ligand interaction profiler to DNA and RNA. Nucl. Acids Res. (05 May 2021), gkab294. doi: 10.1093/nar/gkab294
Analysis was done on model 1.

UNK:d:0 (UNK) - SMALLMOLECULE
-----------------------------
Interacting chain(s): C,D,E,F


**Hydrophobic Interactions**
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-----------------------+------------------------+
| RESNR | RESTYPE | RESCHAIN | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | DIST | LIGCARBONIDX | PROTCARBONIDX | LIGCOO                | PROTCOO                | 
+=======+=========+==========+===========+=============+==============+======+==============+===============+=======================+========================+
| 54    | ARG     | F        | 0         | UNK         | d            | 3.63 | 27           | 13475         | 45.423, 28.597, 6.594 | 48.535, 28.990, 4.767  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-----------------------+------------------------+
| 99    | LEU     | F        | 0         | UNK         | d            | 3.79 | 18           | 13952         | 46.264, 33.073, 8.225 | 46.165, 33.374, 12.006 | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-----------------------+------------------------+
| 101   | ALA     | D        | 0         | UNK         | d            | 3.65 | 27           | 9067          | 45.423, 28.597, 6.594 | 43.966, 25.250, 6.692  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-----------------------+------------------------+


**Hydrogen Bonds**
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+-----------------------+------------------------+
| RESNR | RESTYPE | RESCHAIN | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | SIDECHAIN | DIST_H-A | DIST_D-A | DON_ANGLE | PROTISDON | DONORIDX | DONORTYPE | ACCEPTORIDX | ACCEPTORTYPE | LIGCOO                | PROTCOO                | 
+=======+=========+==========+===========+=============+==============+===========+==========+==========+===========+===========+==========+===========+=============+==============+=======================+========================+
| 29    | ILE     | C        | 0         | UNK         | d            | False     | 3.01     | 3.56     | 116.99    | False     | 31       | O3        | 5191        | O2           | 46.709, 26.715, 7.283 | 50.176, 25.919, 7.427  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+-----------------------+------------------------+
| 54    | ARG     | F        | 0         | UNK         | d            | True      | 3.40     | 3.83     | 108.18    | True      | 13477    | Ng+       | 31          | O3           | 46.709, 26.715, 7.283 | 47.283, 27.360, 3.552  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+-----------------------+------------------------+
| 58    | LYS     | F        | 0         | UNK         | d            | False     | 2.30     | 3.19     | 152.08    | False     | 37       | O3        | 13517       | O2           | 42.329, 38.863, 3.281 | 45.425, 39.010, 2.528  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+-----------------------+------------------------+
| 60    | ASN     | F        | 0         | UNK         | d            | True      | 2.81     | 3.22     | 106.30    | True      | 13542    | Nam       | 39          | O3           | 39.953, 38.870, 1.542 | 39.602, 41.653, 3.133  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+-----------------------+------------------------+
| 60    | ASN     | F        | 0         | UNK         | d            | False     | 3.14     | 3.56     | 107.61    | True      | 13536    | Nam       | 37          | O3           | 42.329, 38.863, 3.281 | 43.786, 41.911, 2.168  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+-----------------------+------------------------+
| 93    | SER     | D        | 0         | UNK         | d            | True      | 3.30     | 4.07     | 136.58    | False     | 35       | O3        | 8993        | O3           | 38.151, 36.727, 2.324 | 34.730, 34.534, 2.180  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+-----------------------+------------------------+
| 103   | GLU     | F        | 0         | UNK         | d            | True      | 1.89     | 2.81     | 156.47    | False     | 29       | O3        | 13985       | O2           | 48.498, 28.402, 8.575 | 48.885, 28.940, 11.309 | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+-----------------------+------------------------+
| 307   | LYS     | E        | 0         | UNK         | d            | True      | 1.89     | 2.81     | 145.87    | True      | 12760    | N3+       | 37          | O3           | 42.329, 38.863, 3.281 | 42.718, 39.170, 6.049  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+-----------------------+------------------------+
| 311   | GLN     | C        | 0         | UNK         | d            | True      | 2.74     | 3.16     | 106.35    | True      | 7908     | Nam       | 9           | O.co2        | 39.694, 33.147, 3.397 | 38.307, 30.795, 1.803  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+-----------------------+------------------------+


**Salt Bridges**
+-------+---------+----------+---------------+-----------+-------------+--------------+------+-----------+-------------+--------------+-----------------------+-----------------------+
| RESNR | RESTYPE | RESCHAIN | PROT_IDX_LIST | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | DIST | PROTISPOS | LIG_GROUP   | LIG_IDX_LIST | LIGCOO                | PROTCOO               | 
+=======+=========+==========+===============+===========+=============+==============+======+===========+=============+==============+=======================+=======================+
| 307   | LYS     | E        | 12760         | 0         | UNK         | d            | 4.40 | True      | Carboxylate | 1,11         | 42.500, 35.819, 3.199 | 42.718, 39.170, 6.049 | 
+-------+---------+----------+---------------+-----------+-------------+--------------+------+-----------+-------------+--------------+-----------------------+-----------------------+



